Coding

Part:BBa_K2022010

Designed by: Jessica Mazalo, Daniel Winter   Group: iGEM16_UNSW_Australia   (2016-10-11)

RFP, with Periplasm-localisation Tag

Red Fluorescent Protein (RFP) is widely-used reporter protein with an absorption and emission maxima at 555nm and 585nm, respectively. This part fuses a sec-signal tag from the pelB leader sequence (BBa_J32015) to RFP's n-terminus; this targets the protein to the sec pathway (Low et al., 2013) which helps export the fusion product to the periplasm and thus bias its subcellular localisation there.

Usage and Biology

Expression of this part will preferentially fill the periplasm with red fluorescence

Sequence and Feature Information


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 54
    Illegal AgeI site found at 621
    Illegal AgeI site found at 733
  • 1000
    COMPATIBLE WITH RFC[1000]


This part is simply an ORF containing RFP fused to an n-terminal sec signal peptide. To express it, it will need to be put into an expression vector or assembled with a promoter, RBS, and terminator.

Characterisation by UNSW Australia (2016)

Coming soon!

References

Lei, S.P., Lin, H.C., Wang, S.S., Callaway, J. and Wilcox, G., 1987. Characterization of the Erwinia carotovora pelB gene and its product pectate lyase. Journal of bacteriology, 169(9), pp.4379-4383.

Low, K.O., Mahadi, N.M. and Illias, R.M., 2013. Optimisation of signal peptide for recombinant protein secretion in bacterial hosts. Applied Microbiology and Biotechnology, 97(9), pp.3811-3826.

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